The glutamine synthetase gene family in Populus.
Identifieur interne : 002C82 ( Main/Exploration ); précédent : 002C81; suivant : 002C83The glutamine synthetase gene family in Populus.
Auteurs : Vanessa Castro-Rodríguez [Espagne] ; Angel García-Gutiérrez ; Javier Canales ; Concepci N Avila ; Edward G. Kirby ; Francisco M. CánovasSource :
- BMC plant biology [ 1471-2229 ] ; 2011.
Descripteurs français
- KwdFr :
- Famille multigénique (MeSH), Glutamate-ammonia ligase (génétique), Gènes dupliqués (MeSH), Hybridation génomique comparative (MeSH), Isoenzymes (génétique), Phylogenèse (MeSH), Populus (croissance et développement), Populus (enzymologie), Populus (génétique), Régulation de l'expression des gènes codant pour des enzymes (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Saisons (MeSH).
- MESH :
- croissance et développement : Populus.
- enzymologie : Populus.
- génétique : Glutamate-ammonia ligase, Isoenzymes, Populus.
- Famille multigénique, Gènes dupliqués, Hybridation génomique comparative, Phylogenèse, Régulation de l'expression des gènes codant pour des enzymes, Régulation de l'expression des gènes végétaux, Saisons.
English descriptors
- KwdEn :
- Comparative Genomic Hybridization (MeSH), Gene Expression Regulation, Enzymologic (MeSH), Gene Expression Regulation, Plant (MeSH), Genes, Duplicate (MeSH), Glutamate-Ammonia Ligase (genetics), Isoenzymes (genetics), Multigene Family (MeSH), Phylogeny (MeSH), Populus (enzymology), Populus (genetics), Populus (growth & development), Seasons (MeSH).
- MESH :
- chemical , genetics : Glutamate-Ammonia Ligase, Isoenzymes.
- enzymology : Populus.
- genetics : Populus.
- growth & development : Populus.
- Comparative Genomic Hybridization, Gene Expression Regulation, Enzymologic, Gene Expression Regulation, Plant, Genes, Duplicate, Multigene Family, Phylogeny, Seasons.
Abstract
BACKGROUND
Glutamine synthetase (GS; EC: 6.3.1.2, L-glutamate: ammonia ligase ADP-forming) is a key enzyme in ammonium assimilation and metabolism of higher plants. The current work was undertaken to develop a more comprehensive understanding of molecular and biochemical features of GS gene family in poplar, and to characterize the developmental regulation of GS expression in various tissues and at various times during the poplar perennial growth.
RESULTS
The GS gene family consists of 8 different genes exhibiting all structural and regulatory elements consistent with their roles as functional genes. Our results indicate that the family members are organized in 4 groups of duplicated genes, 3 of which code for cytosolic GS isoforms (GS1) and 1 which codes for the choroplastic GS isoform (GS2). Our analysis shows that Populus trichocarpa is the first plant species in which it was observed the complete GS family duplicated. Detailed expression analyses have revealed specific spatial and seasonal patterns of GS expression in poplar. These data provide insights into the metabolic function of GS isoforms in poplar and pave the way for future functional studies.
CONCLUSIONS
Our data suggest that GS duplicates could have been retained in order to increase the amount of enzyme in a particular cell type. This possibility could contribute to the homeostasis of nitrogen metabolism in functions associated to changes in glutamine-derived metabolic products. The presence of duplicated GS genes in poplar could also contribute to diversification of the enzymatic properties for a particular GS isoform through the assembly of GS polypeptides into homo oligomeric and/or hetero oligomeric holoenzymes in specific cell types.
DOI: 10.1186/1471-2229-11-119
PubMed: 21867507
PubMed Central: PMC3224142
Affiliations:
Links toward previous steps (curation, corpus...)
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Kirby</name></author><author><name sortKey="Canovas, Francisco M" sort="Canovas, Francisco M" uniqKey="Canovas F" first="Francisco M" last="Cánovas">Francisco M. 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Kirby</name></author><author><name sortKey="Canovas, Francisco M" sort="Canovas, Francisco M" uniqKey="Canovas F" first="Francisco M" last="Cánovas">Francisco M. Cánovas</name></author></analytic><series><title level="j">BMC plant biology</title><idno type="eISSN">1471-2229</idno><imprint><date when="2011" type="published">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Comparative Genomic Hybridization (MeSH)</term><term>Gene Expression Regulation, Enzymologic (MeSH)</term><term>Gene Expression Regulation, Plant (MeSH)</term><term>Genes, Duplicate (MeSH)</term><term>Glutamate-Ammonia Ligase (genetics)</term><term>Isoenzymes (genetics)</term><term>Multigene Family (MeSH)</term><term>Phylogeny (MeSH)</term><term>Populus (enzymology)</term><term>Populus (genetics)</term><term>Populus (growth & development)</term><term>Seasons (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Famille multigénique (MeSH)</term><term>Glutamate-ammonia ligase (génétique)</term><term>Gènes dupliqués (MeSH)</term><term>Hybridation génomique comparative (MeSH)</term><term>Isoenzymes (génétique)</term><term>Phylogenèse (MeSH)</term><term>Populus (croissance et développement)</term><term>Populus (enzymologie)</term><term>Populus (génétique)</term><term>Régulation de l'expression des gènes codant pour des enzymes (MeSH)</term><term>Régulation de l'expression des gènes végétaux (MeSH)</term><term>Saisons (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Glutamate-Ammonia Ligase</term><term>Isoenzymes</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="enzymologie" xml:lang="fr"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="enzymology" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Glutamate-ammonia ligase</term><term>Isoenzymes</term><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Comparative Genomic Hybridization</term><term>Gene Expression Regulation, Enzymologic</term><term>Gene Expression Regulation, Plant</term><term>Genes, Duplicate</term><term>Multigene Family</term><term>Phylogeny</term><term>Seasons</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Famille multigénique</term><term>Gènes dupliqués</term><term>Hybridation génomique comparative</term><term>Phylogenèse</term><term>Régulation de l'expression des gènes codant pour des enzymes</term><term>Régulation de l'expression des gènes végétaux</term><term>Saisons</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b></p><p>Glutamine synthetase (GS; EC: 6.3.1.2, L-glutamate: ammonia ligase ADP-forming) is a key enzyme in ammonium assimilation and metabolism of higher plants. The current work was undertaken to develop a more comprehensive understanding of molecular and biochemical features of GS gene family in poplar, and to characterize the developmental regulation of GS expression in various tissues and at various times during the poplar perennial growth.</p></div><div type="abstract" xml:lang="en"><p><b>RESULTS</b></p><p>The GS gene family consists of 8 different genes exhibiting all structural and regulatory elements consistent with their roles as functional genes. Our results indicate that the family members are organized in 4 groups of duplicated genes, 3 of which code for cytosolic GS isoforms (GS1) and 1 which codes for the choroplastic GS isoform (GS2). Our analysis shows that Populus trichocarpa is the first plant species in which it was observed the complete GS family duplicated. Detailed expression analyses have revealed specific spatial and seasonal patterns of GS expression in poplar. These data provide insights into the metabolic function of GS isoforms in poplar and pave the way for future functional studies.</p></div><div type="abstract" xml:lang="en"><p><b>CONCLUSIONS</b></p><p>Our data suggest that GS duplicates could have been retained in order to increase the amount of enzyme in a particular cell type. This possibility could contribute to the homeostasis of nitrogen metabolism in functions associated to changes in glutamine-derived metabolic products. The presence of duplicated GS genes in poplar could also contribute to diversification of the enzymatic properties for a particular GS isoform through the assembly of GS polypeptides into homo oligomeric and/or hetero oligomeric holoenzymes in specific cell types.</p></div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">21867507</PMID><DateCompleted><Year>2012</Year><Month>02</Month><Day>03</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1471-2229</ISSN><JournalIssue CitedMedium="Internet"><Volume>11</Volume><PubDate><Year>2011</Year><Month>Aug</Month><Day>25</Day></PubDate></JournalIssue><Title>BMC plant biology</Title><ISOAbbreviation>BMC Plant Biol</ISOAbbreviation></Journal><ArticleTitle>The glutamine synthetase gene family in Populus.</ArticleTitle><Pagination><MedlinePgn>119</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1186/1471-2229-11-119</ELocationID><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Glutamine synthetase (GS; EC: 6.3.1.2, L-glutamate: ammonia ligase ADP-forming) is a key enzyme in ammonium assimilation and metabolism of higher plants. The current work was undertaken to develop a more comprehensive understanding of molecular and biochemical features of GS gene family in poplar, and to characterize the developmental regulation of GS expression in various tissues and at various times during the poplar perennial growth.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">The GS gene family consists of 8 different genes exhibiting all structural and regulatory elements consistent with their roles as functional genes. Our results indicate that the family members are organized in 4 groups of duplicated genes, 3 of which code for cytosolic GS isoforms (GS1) and 1 which codes for the choroplastic GS isoform (GS2). Our analysis shows that Populus trichocarpa is the first plant species in which it was observed the complete GS family duplicated. Detailed expression analyses have revealed specific spatial and seasonal patterns of GS expression in poplar. These data provide insights into the metabolic function of GS isoforms in poplar and pave the way for future functional studies.</AbstractText><AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">Our data suggest that GS duplicates could have been retained in order to increase the amount of enzyme in a particular cell type. This possibility could contribute to the homeostasis of nitrogen metabolism in functions associated to changes in glutamine-derived metabolic products. The presence of duplicated GS genes in poplar could also contribute to diversification of the enzymatic properties for a particular GS isoform through the assembly of GS polypeptides into homo oligomeric and/or hetero oligomeric holoenzymes in specific cell types.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Castro-Rodríguez</LastName><ForeName>Vanessa</ForeName><Initials>V</Initials><AffiliationInfo><Affiliation>Departamento de Biología Molecular y Bioquímica, Instituto Andaluz de Biotecnología, Universidad de Málaga, 29071-Málaga, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>García-Gutiérrez</LastName><ForeName>Angel</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Canales</LastName><ForeName>Javier</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Avila</LastName><ForeName>Concepción</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Kirby</LastName><ForeName>Edward G</ForeName><Initials>EG</Initials></Author><Author ValidYN="Y"><LastName>Cánovas</LastName><ForeName>Francisco M</ForeName><Initials>FM</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2011</Year><Month>08</Month><Day>25</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>BMC Plant Biol</MedlineTA><NlmUniqueID>100967807</NlmUniqueID><ISSNLinking>1471-2229</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D007527">Isoenzymes</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 6.3.1.2</RegistryNumber><NameOfSubstance UI="D005974">Glutamate-Ammonia 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IdType="pubmed">2849754</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Espagne</li></country><region><li>Andalousie</li></region><settlement><li>Malaga</li></settlement><orgName><li>Université de Malaga</li></orgName></list><tree><noCountry><name sortKey="Avila, Concepci N" sort="Avila, Concepci N" uniqKey="Avila C" first="Concepci N" last="Avila">Concepci N Avila</name><name sortKey="Canales, Javier" sort="Canales, Javier" uniqKey="Canales J" first="Javier" last="Canales">Javier Canales</name><name sortKey="Canovas, Francisco M" sort="Canovas, Francisco M" uniqKey="Canovas F" first="Francisco M" last="Cánovas">Francisco M. Cánovas</name><name sortKey="Garcia Gutierrez, Angel" sort="Garcia Gutierrez, Angel" uniqKey="Garcia Gutierrez A" first="Angel" last="García-Gutiérrez">Angel García-Gutiérrez</name><name sortKey="Kirby, Edward G" sort="Kirby, Edward G" uniqKey="Kirby E" first="Edward G" last="Kirby">Edward G. Kirby</name></noCountry><country name="Espagne"><region name="Andalousie"><name sortKey="Castro Rodriguez, Vanessa" sort="Castro Rodriguez, Vanessa" uniqKey="Castro Rodriguez V" first="Vanessa" last="Castro-Rodríguez">Vanessa Castro-Rodríguez</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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